SNP Profiles of PNG 218 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CT	AC	GG	GT	AT	AA	CC	GG	GG	AG	TT	AC
1._RUQ_1294	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
2._RUQ_1294	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
3._PNG_218	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
4._PNG_218	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
5._PNG_218	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
6._PNG_218	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
7._GC-01-108-6-05	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
8._GC-01-108-6-05	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
9._GC-01-108-6-05	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
10._GC-01-108-6-05	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
11._RUQ_1294	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AC	CT	AC	CC	AC	AG	GG	TT	CC	CT	TT	AG	CC
1._RUQ_1294	GG	_	_	_	_	CC	_	GG	_	CC	CT	_	_	_
2._RUQ_1294	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
3._PNG_218	_	_	_	_	_	CC	_	CG	_	CC	_	_	_	_
4._PNG_218	_	_	_	_	_	CC	_	CG	_	CC	_	_	_	_
5._PNG_218	_	_	_	_	_	CC	_	CG	_	CC	_	_	_	_
6._PNG_218	_	_	_	_	_	CC	_	CG	_	CC	_	_	_	_
7._GC-01-108-6-05	AG	_	_	_	_	CC	_	CG	_	CC	CC	_	_	_
8._GC-01-108-6-05	AG	_	_	_	_	CC	_	CG	_	CC	CC	_	_	_
9._GC-01-108-6-05	AG	_	_	_	_	CC	_	CG	_	CC	CC	_	_	_
10._GC-01-108-6-05	AG	_	_	_	_	CC	_	CG	_	CC	CC	_	_	_
11._RUQ_1294	GG	_	_	_	_	CC	_	GG	_	CC	AG	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CG	TT	GT	GG	TT	TT	AC	AT	TT	CC	GG	CC	AG
1._RUQ_1294	_	_	TT	GT	GG	_	_	AC	_	_	CC	-	_	AG
2._RUQ_1294	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
3._PNG_218	AG	_	_	GG	_	_	_	_	_	_	CC	_	_	AG
4._PNG_218	AG	_	_	GG	_	_	_	_	_	_	CC	_	_	AG
5._PNG_218	AG	_	_	GG	_	_	_	_	_	_	CC	_	_	AG
6._PNG_218	AG	_	_	GG	_	_	_	_	_	_	CC	_	_	AG
7._GC-01-108-6-05	AG	_	CC	GG	GG	_	_	CC	_	GG	CC	GG	_	AG
8._GC-01-108-6-05	AG	_	CC	GG	GG	_	_	CC	_	GG	CC	GG	_	AG
9._GC-01-108-6-05	AG	_	CC	GG	GG	_	_	CC	_	GG	CC	GG	_	AG
10._GC-01-108-6-05	AG	_	CC	GG	GG	_	_	CC	_	GG	CC	GG	_	AG
11._RUQ_1294	_	_	_	AC	GG	_	_	AC	_	CC	GG	GG	_	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	TT	AA	CC	GG	CT	CT	GT	AA	CC	TT	TT	AT	AG
1._RUQ_1294	TT	_	_	_	_	_	_	_	_	_	TT	_	_	_
2._RUQ_1294	_	_	_	_	GG	_	CT	_	_	_	TT	_	_	_
3._PNG_218	_	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
4._PNG_218	_	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
5._PNG_218	_	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
6._PNG_218	_	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
7._GC-01-108-6-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
8._GC-01-108-6-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
9._GC-01-108-6-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
10._GC-01-108-6-05	CT	_	_	_	AG	_	CT	_	_	_	GT	_	_	_
11._RUQ_1294	_	_	_	_	GG	_	_	_	_	_	AA	_	_	_

	57	58	59	60
_Input profile	GG	GG	CT	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1294	_	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1294	_	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._PNG_218	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._PNG_218	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._PNG_218	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._PNG_218	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-01-108-6-05	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-01-108-6-05	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-01-108-6-05	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GC-01-108-6-05	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_1294	_	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: PNG_218 RUQ_1294

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._PNG_218 RUQ_1294

96.9 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._PNG_218 RUQ_1294

96.2 %
13 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._PNG_218

69.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1605 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

4._PNG_218

69.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1605 2

Dapeng Zhang, 2016

5._PNG_218

69.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1605 3

Dapeng Zhang, 2016

6._PNG_218

69.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1605 4

Dapeng Zhang, 2016

7._PNG_218 GC-01-108-6-05

61.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

8._PNG_218 GC-01-108-6-05

61.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

9._PNG_218 GC-01-108-6-05

61.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

10._PNG_218 GC-01-108-6-05

61.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

11._PNG_218 RUQ_1294

61.8 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1237	53	TcSNP1253	54	TcSNP1275	55	TcSNP1293
56	TcSNP1401	57	TcSNP1404	58	TcSNP1458	59	TcSNP1524	60	TcSNP1527